ChIP-seq Workflow

R ile Bioconductor kullanarak ChIP-seq

Peter Humburg

Statistician, Macquarie University

R ile Bioconductor kullanarak ChIP-seq

R ile Bioconductor kullanarak ChIP-seq

R ile Bioconductor kullanarak ChIP-seq

R ile Bioconductor kullanarak ChIP-seq

R ile Bioconductor kullanarak ChIP-seq

R ile Bioconductor kullanarak ChIP-seq

Summarizing results

Creating a heat map

heatmap(read_counts)

R ile Bioconductor kullanarak ChIP-seq

Summarizing results

Creating UpSet plots

upset(fromList(peak_sets))

R ile Bioconductor kullanarak ChIP-seq

Let's practice!

R ile Bioconductor kullanarak ChIP-seq

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