A closer look at differential binding

ChIP-seq with Bioconductor in R

Peter Humburg

Statistician, Macquarie University

Creating MA plots with *DiffBind*

dba.plotMA(dba_object)
ChIP-seq with Bioconductor in R

ChIP-seq with Bioconductor in R

ChIP-seq with Bioconductor in R

Creating Volcano plots with *DiffBind*

dba.plotVolcano(dba_object)

ChIP-seq with Bioconductor in R

ChIP-seq with Bioconductor in R

Creating Box plots with *DiffBind*

dba.plotBox(dba_object)
ChIP-seq with Bioconductor in R

ChIP-seq with Bioconductor in R

Let's practice!

ChIP-seq with Bioconductor in R

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