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Introduction to Bioconductor in R

Paula Andrea Martinez, PhD.

Data Scientist

You learned...

• Install packages from Bioconductor by using the BiocManager package.
• Techniques for reading, manipulating and filtering raw genomic data using BioStrings, GenomicRanges and ShortRead.
• To work with BSgenome and TxDb built-in datasets. Then used these to identify patterns by using matching functions.
• Check the quality of sequence files using ShortRead and Rqc.

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Introduction to Bioconductor in R